Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_06715 | Not Available | Negative | 1660818 - 1661126 | 12084.6 |
| hypothetical protein | DWX60_06720 | Not Available | Negative | 1661069 - 1661797 | 28523.1 |
| hypothetical protein | DWX60_06725 | Not Available | Positive | 1661823 - 1662266 | 17109.1 |
| duf4491 family protein | DWX60_06730 | Not Available | Negative | 1662466 - 1662780 | 12155.1 |
| asnc family transcriptional regulator | DWX60_06735 | Not Available | Negative | 1662787 - 1663245 | 17087.9 |
| hypothetical protein | DWX60_06740 | Not Available | Negative | 1663362 - 1663745 | 15190.0 |
| hlyc/corc family transporter | DWX60_06745 | Not Available | Negative | 1663768 - 1665054 | 48001.9 |
| nudix domain-containing protein | DWX60_06750 | Not Available | Positive | 1665189 - 1665713 | 19830.5 |
| tetratricopeptide repeat protein | DWX60_06755 | Not Available | Positive | 1665723 - 1668626 | 111213.0 |
| tonb-dependent receptor | DWX60_06760 | Not Available | Positive | 1668650 - 1670347 | 64322.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

