Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 127 protein | DWX60_00610 | Not Available | Negative | 154463 - 156898 | 91096.0 |
| invertase | DWX60_00615 | Not Available | Positive | 157277 - 157888 | 23063.3 |
| hypothetical protein | DWX60_00620 | Not Available | Negative | 158729 - 159310 | 22444.9 |
| hypothetical protein | DWX60_00625 | Not Available | Negative | 159285 - 159584 | 11657.8 |
| tonb-dependent receptor | DWX60_00630 | Not Available | Positive | 159776 - 162805 | 112994.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX60_00635 | Not Available | Positive | 162826 - 164505 | 63716.1 |
| duf4859 domain-containing protein | DWX60_00640 | Not Available | Positive | 164537 - 165547 | 36202.2 |
| duf4859 domain-containing protein | DWX60_00645 | Not Available | Positive | 165803 - 168067 | 84424.6 |
| glycoside hydrolase family 97 protein | DWX60_00650 | Not Available | Positive | 168266 - 170989 | 103267.0 |
| glycoside hydrolase | DWX60_00655 | Not Available | Positive | 171026 - 173428 | 89865.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

