Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_06610 | Not Available | Positive | 1640721 - 1641401 | 26160.7 |
| hypothetical protein | DWX60_06615 | Not Available | Positive | 1641417 - 1641809 | 15266.8 |
| hypothetical protein | DWX60_06620 | Not Available | Negative | 1642249 - 1642452 | 7696.4 |
| glycosyl hydrolase family 88 | DWX60_06625 | Not Available | Positive | 1642786 - 1644084 | 49792.5 |
| hypothetical protein | DWX60_06630 | Not Available | Negative | 1644141 - 1644638 | 18633.8 |
| hypothetical protein | DWX60_06635 | Not Available | Negative | 1644651 - 1645298 | 24488.9 |
| hypothetical protein | DWX60_06640 | Not Available | Positive | 1645478 - 1645726 | 9253.75 |
| hypothetical protein | DWX60_06645 | Not Available | Positive | 1645931 - 1646149 | 7976.9 |
| thioredoxin | DWX60_06650 | Not Available | Positive | 1646152 - 1646631 | 17688.5 |
| transcriptional regulator | DWX60_06655 | Not Available | Positive | 1646669 - 1647016 | 13249.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

