Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DWX60_06445 | Not Available | Negative | 1607426 - 1609036 | 62447.3 |
| hypothetical protein | DWX60_06450 | Not Available | Positive | 1609084 - 1609305 | 8569.47 |
| hypothetical protein | DWX60_06455 | Not Available | Negative | 1609302 - 1610417 | 41952.6 |
| hypothetical protein | DWX60_06460 | Not Available | Negative | 1610506 - 1613631 | 117141.0 |
| site-specific integrase | DWX60_06470 | Not Available | Negative | 1614033 - 1615151 | 43257.0 |
| holliday junction branch migration dna helicase ruvb | DWX60_06475 | Not Available | Positive | 1615278 - 1616306 | 38022.6 |
| lipopolysaccharide biosynthesis protein | DWX60_06480 | Not Available | Positive | 1616310 - 1617755 | 54344.9 |
| tigr00341 family protein | DWX60_06485 | Not Available | Positive | 1617758 - 1619122 | 50535.2 |
| s46 family peptidase | DWX60_06490 | Not Available | Positive | 1619127 - 1621253 | 80074.8 |
| atp-dependent rna helicase | DWX60_06495 | Not Available | Negative | 1621574 - 1623448 | 70716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

