Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase family protein | DWX60_06340 | Not Available | Positive | 1575224 - 1576354 | 43304.6 |
| hypothetical protein | DWX60_06345 | Not Available | Positive | 1576492 - 1576683 | 7368.51 |
| tonb-dependent receptor | DWX60_06350 | Not Available | Positive | 1576727 - 1579378 | 100820.0 |
| duf4249 domain-containing protein | DWX60_06355 | Not Available | Positive | 1579385 - 1580371 | 38261.2 |
| rna polymerase sigma-70 factor | DWX60_06360 | Not Available | Positive | 1580424 - 1581050 | 24869.6 |
| hypothetical protein | DWX60_06365 | Not Available | Positive | 1581106 - 1581513 | 15515.8 |
| duf4974 domain-containing protein | DWX60_06370 | Not Available | Positive | 1581540 - 1582430 | 33758.5 |
| tonb-dependent receptor | DWX60_06375 | Not Available | Positive | 1582438 - 1585113 | 102190.0 |
| duf4249 domain-containing protein | DWX60_06380 | Not Available | Positive | 1585120 - 1586151 | 39226.1 |
| sialate o-acetylesterase | DWX60_06385 | Not Available | Negative | 1586183 - 1588120 | 72361.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

