Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DWX60_05920 | Not Available | Positive | 1469452 - 1470210 | 28645.4 |
| duf4369 domain-containing protein | DWX60_05925 | Not Available | Negative | 1470224 - 1470901 | 25343.6 |
| s46 family peptidase | DWX60_05930 | Not Available | Positive | 1471116 - 1473281 | 81276.0 |
| s46 family peptidase | DWX60_05935 | Not Available | Positive | 1473281 - 1475467 | 82695.7 |
| hypothetical protein | DWX60_05940 | Not Available | Negative | 1475585 - 1475902 | 12033.2 |
| septum formation initiator family protein | DWX60_05945 | Not Available | Negative | 1475926 - 1476222 | 11882.5 |
| dna polymerase iii subunit gamma/tau | DWX60_05950 | Not Available | Positive | 1476341 - 1478152 | 67599.0 |
| hypothetical protein | DWX60_05955 | Not Available | Positive | 1478354 - 1478625 | 10339.1 |
| duf4982 domain-containing protein | DWX60_05960 | Not Available | Negative | 1478683 - 1481187 | 94092.9 |
| glycoside hydrolase family 92 protein | DWX60_05965 | Not Available | Negative | 1481190 - 1483442 | 85487.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

