Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose mutarotase | DWX60_05615 | Not Available | Positive | 1396980 - 1398074 | 39986.6 |
| mfs transporter | DWX60_05620 | Not Available | Positive | 1398121 - 1399461 | 47498.5 |
| galactokinase | DWX60_05625 | Not Available | Positive | 1399502 - 1400656 | 42994.0 |
| galactose mutarotase | DWX60_05630 | Not Available | Positive | 1400853 - 1402007 | 41950.6 |
| sss family transporter | DWX60_05635 | Not Available | Positive | 1402034 - 1403776 | 64455.8 |
| nudix hydrolase | DWX60_05640 | Not Available | Positive | 1403852 - 1404529 | 26233.5 |
| l-ribulose-5-phosphate 4-epimerase | DWX60_05645 | Not Available | Positive | 1404600 - 1405286 | 24994.8 |
| l-arabinose isomerase | DWX60_05650 | Not Available | Positive | 1405326 - 1406855 | 57229.3 |
| atpase | DWX60_05655 | Not Available | Positive | 1406958 - 1408556 | 57774.1 |
| transketolase | DWX60_05660 | Not Available | Positive | 1408691 - 1410703 | 72436.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

