Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4476 domain-containing protein | DWX60_05565 | Not Available | Positive | 1386668 - 1387339 | 25488.8 |
| duf4476 domain-containing protein | DWX60_05570 | Not Available | Positive | 1387373 - 1387984 | 22961.6 |
| hypothetical protein | DWX60_05575 | Not Available | Negative | 1388054 - 1388377 | 11453.6 |
| cytidine deaminase | DWX60_05580 | Not Available | Positive | 1388597 - 1389076 | 17630.1 |
| winged helix dna-binding domain-containing protein | DWX60_05585 | Not Available | Positive | 1389073 - 1390125 | 40494.7 |
| sgnh/gdsl hydrolase family protein | DWX60_05590 | Not Available | Negative | 1390192 - 1391703 | 57342.3 |
| abc-f family atpase | DWX60_05595 | Not Available | Negative | 1391892 - 1393511 | 61289.0 |
| nucleotide exchange factor grpe | DWX60_05600 | Not Available | Positive | 1393689 - 1394309 | 23521.8 |
| molecular chaperone dnaj | DWX60_05605 | Not Available | Positive | 1394329 - 1395504 | 42201.2 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DWX60_05610 | Not Available | Positive | 1395599 - 1396885 | 48014.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

