Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DWX60_05260 | Not Available | Negative | 1324035 - 1326131 | 80640.3 |
| hypothetical protein | DWX60_05265 | Not Available | Negative | 1326888 - 1327319 | 17030.1 |
| hypothetical protein | DWX60_05270 | Not Available | Negative | 1327964 - 1328146 | 6895.11 |
| transglutaminase domain-containing protein | DWX60_05275 | Not Available | Negative | 1328486 - 1329994 | 57599.3 |
| hypothetical protein | DWX60_05280 | Not Available | Negative | 1330006 - 1330482 | 17607.2 |
| peptidase domain-containing abc transporter | DWX60_05285 | Not Available | Negative | 1330688 - 1332853 | 81365.3 |
| thioredoxin family protein | DWX60_05290 | Not Available | Negative | 1332868 - 1333389 | 20384.5 |
| hypothetical protein | DWX60_05295 | Not Available | Negative | 1333374 - 1334027 | 25273.8 |
| hypothetical protein | DWX60_05300 | Not Available | Negative | 1334300 - 1334521 | 7183.72 |
| tetratricopeptide repeat protein | DWX60_05305 | Not Available | Negative | 1334553 - 1335581 | 38913.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

