Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase | DWX60_05205 | Not Available | Negative | 1312005 - 1312814 | 30240.0 |
| hypothetical protein | DWX60_05210 | Not Available | Negative | 1312829 - 1314037 | 45833.1 |
| dna mismatch repair endonuclease mutl | DWX60_05215 | Not Available | Negative | 1314266 - 1316134 | 68716.8 |
| hypothetical protein | DWX60_05220 | Not Available | Negative | 1316156 - 1316452 | 11737.6 |
| hypothetical protein | DWX60_05225 | Not Available | Negative | 1316455 - 1318122 | 63852.4 |
| peptidylprolyl isomerase | DWX60_05230 | Not Available | Negative | 1318140 - 1319498 | 52289.8 |
| peptidyl-prolyl cis-trans isomerase | DWX60_05235 | Not Available | Negative | 1319503 - 1320375 | 34104.5 |
| peptidylprolyl isomerase | DWX60_05240 | Not Available | Negative | 1320412 - 1321749 | 52191.4 |
| imp dehydrogenase | DWX60_05245 | Not Available | Negative | 1321762 - 1323237 | 52760.1 |
| hypothetical protein | DWX60_05255 | Not Available | Positive | 1323489 - 1323923 | 17227.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

