Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DWX60_05155 | Not Available | Positive | 1297390 - 1300611 | 119492.0 |
| tonb-dependent receptor | DWX60_05160 | Not Available | Negative | 1300677 - 1303481 | 106548.0 |
| tlpa family protein disulfide reductase | DWX60_05165 | Not Available | Negative | 1303502 - 1304002 | 19109.3 |
| peroxide stress protein yaaa | DWX60_05170 | Not Available | Positive | 1304090 - 1304857 | 29348.5 |
| hypothetical protein | DWX60_05175 | Not Available | Positive | 1304964 - 1306163 | 43736.0 |
| sulfotransferase | DWX60_05180 | Not Available | Negative | 1306241 - 1307347 | 43290.1 |
| sulfate adenylyltransferase subunit cysn | DWX60_05185 | Not Available | Negative | 1307375 - 1308832 | 54434.4 |
| sulfate adenylyltransferase subunit cysd | DWX60_05190 | Not Available | Negative | 1308869 - 1309780 | 35794.7 |
| adenylyl-sulfate kinase | DWX60_05195 | Not Available | Negative | 1309792 - 1310406 | 22681.6 |
| slc13/dass family transporter | DWX60_05200 | Not Available | Negative | 1310436 - 1311989 | 56631.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

