Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_05105 | Not Available | Negative | 1287752 - 1288267 | 19807.7 |
| hypothetical protein | DWX60_05110 | Not Available | Negative | 1288287 - 1290743 | 89668.5 |
| endonuclease/exonuclease/phosphatase family protein | DWX60_05115 | Not Available | Negative | 1290771 - 1291709 | 34990.7 |
| cysteine synthase a | DWX60_05120 | Not Available | Positive | 1291855 - 1292805 | 33551.6 |
| trna 2-thiouridine(34) synthase mnma | DWX60_05125 | Not Available | Positive | 1292812 - 1293876 | 39768.7 |
| dna-binding response regulator | DWX60_05130 | Not Available | Negative | 1293873 - 1294523 | 24599.1 |
| Trna-val | Not Available | Not Available | Positive | 1294592 - 1294669 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1294856 - 1294930 | Not Available |
| tryptophan--trna ligase | DWX60_05145 | Not Available | Negative | 1295146 - 1296240 | 41376.8 |
| hypothetical protein | DWX60_05150 | Not Available | Positive | 1296344 - 1297135 | 29912.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

