Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 protein | DWX60_00455 | Not Available | Positive | 94414 - 97008 | 96045.1 |
| abc transporter atp-binding protein | DWX60_00460 | Not Available | Negative | 97098 - 98690 | 59359.8 |
| arylsulfatase | DWX60_00465 | Not Available | Negative | 98947 - 100473 | 57751.4 |
| sulfatase | DWX60_00470 | Not Available | Negative | 100584 - 102005 | 52951.9 |
| ragb/susd family nutrient uptake outer membrane protein | DWX60_00475 | Not Available | Negative | 102100 - 104022 | 73085.9 |
| susc/raga family tonb-linked outer membrane protein | DWX60_00480 | Not Available | Negative | 104044 - 107571 | 131521.0 |
| fecr family protein | DWX60_00485 | Not Available | Negative | 107636 - 108646 | 38718.6 |
| protease | DWX60_00495 | Not Available | Positive | 109500 - 112724 | 120839.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX60_00500 | Not Available | Negative | 112791 - 114572 | 68797.7 |
| tonb-dependent receptor | DWX60_00505 | Not Available | Negative | 114587 - 117640 | 113928.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

