Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF20-10
Accession NumberQRWE00000000.1
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 74 - 184 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 263 - 3155 | Not Available |
| pp_00001 | DWX60_00005 | Not Available | - | 306 - 1223 | Not Available |
| acyl-coa thioesterase | DWX60_00010 | Not Available | + | 1282 - 1689 | 15657.8 |
| dna-protecting protein dpra | DWX60_00015 | Not Available | + | 1686 - 2801 | 40930.4 |
| 16s ribosomal rna | Not Available | Not Available | + | 3577 - 5110 | Not Available |
| glycoside hydrolase family 29 | DWX60_00020 | Not Available | - | 2882 - 4765 | 70615.9 |
| duf3575 domain-containing protein | DWX60_00030 | Not Available | + | 5360 - 6727 | 52156.3 |
| duf5119 domain-containing protein | DWX60_00035 | Not Available | + | 6694 - 7689 | 36267.8 |
| fimbrillin family protein | DWX60_00040 | Not Available | + | 7738 - 8727 | 35820.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
