Bacteroides ovatus strain AF20-9LB

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides ovatus strain AF20-9LB is a Gram-negative, rod-shaped bacterium classified as an anaerobe, indicating that it thrives in environments devoid of oxygen. This strain has been identified as part of the gut microbiota of Homo sapiens, suggesting a specific ecological role in the human gastrointestinal tract. Notably, Bacteroides ovatus has a single replicon, which is characteristic of many bacteria and can have implications for its genetic stability and replication processes. The presence of flagella in Bacteroides ovatus strain AF20-9LB may facilitate motility, allowing the bacterium to navigate through the complex environment of the gut. This motility can enhance its ability to colonize and interact with the intestinal mucosa, potentially influencing interactions with host cells and other microbial communities. The ecological significance of Bacteroides ovatus lies in its contribution to the human gut microbiome. Bacteroides species are known to play a role in the breakdown of complex carbohydrates and fibers, aiding in digestion and contributing to the host's nutrient absorption. The presence of such microbes in the gut is crucial not only for digestive health but also for maintaining a balanced microbial ecosystem, which can affect overall health and disease susceptibility. Understanding the traits of Bacteroides ovatus strain AF20-9LB can provide insights into its functional roles within the gut microbiome and its potential implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides ovatus
Strainstrain AF20-9LB

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides ovatus strain AF20-9LB
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides ovatus strain AF20-9LB AF20-9LB.Scaf98, whole genome

Gene Summary

Adenine Count

1977624 bp

Thymine Count

2000749 bp

Guanine Count

1471998 bp

Cytosine Count

1401447 bp

Genome Length

6853285 bp

Protein-coding Genes

5283 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pirin family proteinDWX70_01230Not AvailableNegative330696 - 33140026509.4
2-hydroxyacid dehydrogenaseDWX70_01235Not AvailableNegative331464 - 33246537193.6
hypothetical proteinDWX70_01240Not AvailablePositive332674 - 33408350914.4
hypothetical proteinDWX70_01245Not AvailableNegative334167 - 33545648035.0
rna polymerase sigma factorDWX70_01250Not AvailablePositive335620 - 33612620117.2
vut family proteinDWX70_01255Not AvailablePositive336366 - 33704624841.3
7-cyano-7-deazaguanine synthase quecDWX70_01260Not AvailablePositive337055 - 33771424599.4
nadph-dependent 7-cyano-7-deazaguanine reductase quefDWX70_01265Not AvailablePositive338295 - 33875017684.3
hd domain-containing proteinDWX70_01270Not AvailablePositive338788 - 33942324865.4
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhDWX70_01275Not AvailableNegative339484 - 33995718255.5

Displaying genes 291 – 300 of 5380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.