Bacteroides ovatus strain AF20-9LB

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides ovatus strain AF20-9LB is a Gram-negative, rod-shaped bacterium classified as an anaerobe, indicating that it thrives in environments devoid of oxygen. This strain has been identified as part of the gut microbiota of Homo sapiens, suggesting a specific ecological role in the human gastrointestinal tract. Notably, Bacteroides ovatus has a single replicon, which is characteristic of many bacteria and can have implications for its genetic stability and replication processes. The presence of flagella in Bacteroides ovatus strain AF20-9LB may facilitate motility, allowing the bacterium to navigate through the complex environment of the gut. This motility can enhance its ability to colonize and interact with the intestinal mucosa, potentially influencing interactions with host cells and other microbial communities. The ecological significance of Bacteroides ovatus lies in its contribution to the human gut microbiome. Bacteroides species are known to play a role in the breakdown of complex carbohydrates and fibers, aiding in digestion and contributing to the host's nutrient absorption. The presence of such microbes in the gut is crucial not only for digestive health but also for maintaining a balanced microbial ecosystem, which can affect overall health and disease susceptibility. Understanding the traits of Bacteroides ovatus strain AF20-9LB can provide insights into its functional roles within the gut microbiome and its potential implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides ovatus
Strainstrain AF20-9LB

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides ovatus strain AF20-9LB
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides ovatus strain AF20-9LB AF20-9LB.Scaf98, whole genome

Gene Summary

Adenine Count

1977624 bp

Thymine Count

2000749 bp

Guanine Count

1471998 bp

Cytosine Count

1401447 bp

Genome Length

6853285 bp

Protein-coding Genes

5283 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding proteinDWX70_07235Not AvailableNegative1939327 - 193996524049.8
helicaseDWX70_07240Not AvailablePositive1940275 - 194158550528.0
rna polymerase sigma-70 factorDWX70_07245Not AvailablePositive1941955 - 194252422438.1
duf4974 domain-containing proteinDWX70_07250Not AvailablePositive1942769 - 194398345631.1
susc/raga family tonb-linked outer membrane proteinDWX70_07255Not AvailablePositive1944035 - 1947391126116.0
ragb/susd family nutrient uptake outer membrane proteinDWX70_07260Not AvailablePositive1947406 - 194892957708.2
duf4843 domain-containing proteinDWX70_07265Not AvailablePositive1948951 - 194969728381.9
hypothetical proteinDWX70_07270Not AvailablePositive1949716 - 195138963724.4
s9 family peptidaseDWX70_07275Not AvailablePositive1951472 - 195379689267.9
s9 family peptidaseDWX70_07280Not AvailablePositive1953815 - 195617290974.9

Displaying genes 1461 – 1470 of 5380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.