Bacteroides ovatus strain AF20-9LB

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides ovatus strain AF20-9LB is a Gram-negative, rod-shaped bacterium classified as an anaerobe, indicating that it thrives in environments devoid of oxygen. This strain has been identified as part of the gut microbiota of Homo sapiens, suggesting a specific ecological role in the human gastrointestinal tract. Notably, Bacteroides ovatus has a single replicon, which is characteristic of many bacteria and can have implications for its genetic stability and replication processes. The presence of flagella in Bacteroides ovatus strain AF20-9LB may facilitate motility, allowing the bacterium to navigate through the complex environment of the gut. This motility can enhance its ability to colonize and interact with the intestinal mucosa, potentially influencing interactions with host cells and other microbial communities. The ecological significance of Bacteroides ovatus lies in its contribution to the human gut microbiome. Bacteroides species are known to play a role in the breakdown of complex carbohydrates and fibers, aiding in digestion and contributing to the host's nutrient absorption. The presence of such microbes in the gut is crucial not only for digestive health but also for maintaining a balanced microbial ecosystem, which can affect overall health and disease susceptibility. Understanding the traits of Bacteroides ovatus strain AF20-9LB can provide insights into its functional roles within the gut microbiome and its potential implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides ovatus
Strainstrain AF20-9LB

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides ovatus strain AF20-9LB
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides ovatus strain AF20-9LB AF20-9LB.Scaf98, whole genome

Gene Summary

Adenine Count

1977624 bp

Thymine Count

2000749 bp

Guanine Count

1471998 bp

Cytosine Count

1401447 bp

Genome Length

6853285 bp

Protein-coding Genes

5283 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-galactosidaseDWX70_06405Not AvailableNegative1707507 - 170961580860.9
9-o-acetylesteraseDWX70_06410Not AvailableNegative1709697 - 171163171683.8
alpha-galactosidaseDWX70_06415Not AvailableNegative1711661 - 171363174375.9
hybrid sensor histidine kinase/response regulatorDWX70_06420Not AvailableNegative1713818 - 1717873154264.0
ragb/susd family nutrient uptake outer membrane proteinDWX70_06425Not AvailableNegative1718006 - 171966764119.2
tonb-dependent receptorDWX70_06430Not AvailableNegative1719689 - 1722691111515.0
glycoside hydrolase family 95 proteinDWX70_06435Not AvailablePositive1722992 - 172539189139.9
right-handed parallel beta-helix repeat-containing proteinDWX70_06440Not AvailablePositive1725400 - 172707663463.5
quinolinate synthase nadaDWX70_06445Not AvailableNegative1727215 - 172815334295.4
trmh family rna methyltransferaseDWX70_06455Not AvailablePositive1728655 - 172918219723.9

Displaying genes 1301 – 1310 of 5380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.