Bacteroides uniformis strain AF21-53

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides uniformis strain AF21-53 is a Gram-negative, rod-shaped bacterium that primarily inhabits the gastrointestinal tract of Homo sapiens. This strain is an anaerobe, meaning it thrives in environments devoid of oxygen, specifically within the gut luminal niche of the intestinal tract. The presence of flagella in this bacterium suggests potential motility, which may assist in its colonization and interaction within the complex gut ecosystem. Bacteroides uniformis is notable for its impact on human health, particularly in relation to intestinal inflammation. This characteristic underscores the organism's role in gut health, potentially influencing inflammatory processes that can affect overall well-being. The strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and functionality within the host environment. Given its specific habitat and health effects, Bacteroides uniformis strain AF21-53 exemplifies the intricate relationship between gut microbiota and human health. Understanding such strains is crucial for elucidating their roles in gastrointestinal health and disease, providing insight into potential therapeutic targets for managing intestinal inflammation and related conditions. The accession number for this strain is QRVP00000000.1, which can be used for further reference and study.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides uniformis
Strainstrain AF21-53

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides uniformis strain AF21-53
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; gut luminal niche; intestinal tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides uniformis strain AF21-53 AF21-53.Scaf70, whole genome

Gene Summary

Adenine Count

1302442 bp

Thymine Count

1316688 bp

Guanine Count

1130162 bp

Cytosine Count

1106122 bp

Genome Length

4856052 bp

Protein-coding Genes

3970 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prephenate dehydrogenase/arogenate dehydrogenase family proteinDWX87_15660Not AvailablePositive3774875 - 377564829534.8
dna primaseDWX87_15665Not AvailablePositive3775736 - 377783879437.7
gtp cyclohydrolase i foleDWX87_15670Not AvailableNegative3777861 - 377844822397.3
spor domain-containing proteinDWX87_15675Not AvailableNegative3778458 - 377891616885.4
triose-phosphate isomeraseDWX87_15680Not AvailableNegative3779039 - 377979426687.9
doxx family proteinDWX87_15685Not AvailableNegative3779845 - 378113749298.2
duf1599 domain-containing proteinDWX87_15690Not AvailableNegative3781127 - 378166920577.9
lysm peptidoglycan-binding domain-containing proteinDWX87_15695Not AvailableNegative3781779 - 378264832285.9
atp-dependent dna helicase recgDWX87_15700Not AvailableNegative3782918 - 378501479404.6
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseDWX87_15705Not AvailableNegative3785002 - 378567624790.1

Displaying genes 3081 – 3090 of 4061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Intestinal inflammationCausesPMC10936605

Displaying health effects 1 – 1 of 1 in total