Bacteroides uniformis strain AF21-53

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides uniformis strain AF21-53 is a Gram-negative, rod-shaped bacterium that primarily inhabits the gastrointestinal tract of Homo sapiens. This strain is an anaerobe, meaning it thrives in environments devoid of oxygen, specifically within the gut luminal niche of the intestinal tract. The presence of flagella in this bacterium suggests potential motility, which may assist in its colonization and interaction within the complex gut ecosystem. Bacteroides uniformis is notable for its impact on human health, particularly in relation to intestinal inflammation. This characteristic underscores the organism's role in gut health, potentially influencing inflammatory processes that can affect overall well-being. The strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and functionality within the host environment. Given its specific habitat and health effects, Bacteroides uniformis strain AF21-53 exemplifies the intricate relationship between gut microbiota and human health. Understanding such strains is crucial for elucidating their roles in gastrointestinal health and disease, providing insight into potential therapeutic targets for managing intestinal inflammation and related conditions. The accession number for this strain is QRVP00000000.1, which can be used for further reference and study.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides uniformis
Strainstrain AF21-53

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides uniformis strain AF21-53
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; gut luminal niche; intestinal tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides uniformis strain AF21-53 AF21-53.Scaf70, whole genome

Gene Summary

Adenine Count

1302442 bp

Thymine Count

1316688 bp

Guanine Count

1130162 bp

Cytosine Count

1106122 bp

Genome Length

4856052 bp

Protein-coding Genes

3970 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucosylceramidaseDWX87_13435Not AvailablePositive3252905 - 325441656083.7
duf5125 domain-containing proteinDWX87_13440Not AvailablePositive3254444 - 325577548231.7
hypothetical proteinDWX87_13445Not AvailableNegative3255869 - 325621312398.6
septum formation initiator family proteinDWX87_13450Not AvailableNegative3256210 - 325651812249.6
dna polymerase iii subunit gamma/tauDWX87_13455Not AvailablePositive3256661 - 325847567441.9
sensor histidine kinaseDWX87_13460Not AvailablePositive3258619 - 326049071372.4
sensor histidine kinaseDWX87_13465Not AvailablePositive3260487 - 326244876289.0
4fe-4s dicluster domain-containing proteinDWX87_13470Not AvailablePositive3262685 - 32628555824.73
pyridoxal phosphate-dependent aminotransferaseDWX87_13475Not AvailableNegative3263217 - 326441043039.7
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiDWX87_13480Not AvailableNegative3264492 - 326570644898.2

Displaying genes 2661 – 2670 of 4061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Intestinal inflammationCausesPMC10936605

Displaying health effects 1 – 1 of 1 in total