Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain AF24-12
Accession NumberQRVA00000000.1
Gene Summary
Adenine Count
1073777 bp
Thymine Count
1068693 bp
Guanine Count
868650 bp
Cytosine Count
856647 bp
Genome Length
3868997 bp
Protein-coding Genes
3130 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | DWY11_00135 | Not Available | + | 33702 - 34811 | 41564.7 |
| orotidine-5'-phosphate decarboxylase | DWY11_00140 | Not Available | + | 34867 - 35709 | 31308.4 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DWY11_00145 | Not Available | + | 35912 - 36946 | 37159.6 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DWY11_00150 | Not Available | + | 36954 - 38342 | 51857.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DWY11_00155 | Not Available | + | 38448 - 39218 | 28095.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DWY11_00160 | Not Available | + | 39318 - 40217 | 34908.8 |
| arac family transcriptional regulator | DWY11_00165 | Not Available | - | 41070 - 41186 | 4224.12 |
| had family hydrolase | DWY11_00170 | Not Available | - | 41507 - 42205 | 26335.8 |
| hypothetical protein | DWY11_00175 | Not Available | - | 42718 - 43428 | 26308.4 |
| hypothetical protein | DWY11_00180 | Not Available | - | 43415 - 43726 | 11539.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.