Segatella copri strain AF24-12

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AF24-12 is a Gram-negative, anaerobic bacterium predominantly found in the gut environment. This strain is part of the diverse microbial community residing in the gastrointestinal tract, suggesting its potential role in gut health and homeostasis. The anaerobic nature of S. copri strain AF24-12 indicates that it thrives in oxygen-depleted conditions typical of the intestinal milieu, where it may contribute to various metabolic processes, including fermentation and nutrient utilization. As a member of the gut microbiota, S. copri strain AF24-12 likely engages in symbiotic interactions with the host, which may influence host metabolism and immune responses. The presence of such anaerobic bacteria in the gut underscores the importance of microbial diversity in maintaining gastrointestinal health and functionality. Future studies could elucidate the specific metabolic pathways employed by this strain, potentially revealing its contributions to the overall metabolic network of the gut microbiome and its interactions with other microbial species. Understanding the role of S. copri strain AF24-12 within the gut ecosystem may provide insights into the complex relationships between diet, microbial inhabitants, and host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AF24-12

Accession NumberQRVA00000000.1

Gene Summary

Adenine Count

1073777 bp

Thymine Count

1068693 bp

Guanine Count

868650 bp

Cytosine Count

856647 bp

Genome Length

3868997 bp

Protein-coding Genes

3130 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+81 - 1618Not Available
hypothetical proteinDWY11_00005Not Available+98 - 110236229.9
5s ribosomal rnaNot AvailableNot Available+119 - 231Not Available
helix-turn-helix domain-containing proteinDWY11_00010Not Available+1335 - 5333151105.0
Ncrna_class:rnase_p_rnaNot AvailableNot Available+2564 - 2994Not Available
5s ribosomal rnaNot AvailableNot Available+5841 - 5953Not Available
glutathione peroxidaseDWY11_00015Not Available+6065 - 661921332.2
trpb-like pyridoxal phosphate-dependent enzymeDWY11_00020Not Available-6810 - 817149987.3
transcription-repair coupling factorDWY11_00025Not Available-8657 - 12070129908.0
polyprenol monophosphomannose synthaseDWY11_00030Not Available-12120 - 1286027907.9

Displaying genes 1 – 10 of 3203 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites