Dorea formicigenerans strain AF25-11

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans strain AF25-11 is a Gram-positive anaerobic bacterium predominantly found in the gut of Homo sapiens. This strain is characterized by its ability to thrive in oxygen-free environments, which is typical for many gut microbiota. The presence of flagella suggests that Dorea formicigenerans can exhibit motility, potentially aiding its colonization and interaction within the gut ecosystem. Dorea formicigenerans strain AF25-11 is notable for having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in the complex gut environment. The accession number QRUK00000000.1 provides a reference for further genomic studies and sequence data related to this strain. Understanding the ecological role of Dorea formicigenerans in the human gut is crucial, as members of the Dorea genus are often involved in fermentation processes and the breakdown of complex carbohydrates. This metabolic activity can influence the microbial community structure and the overall health of the host. The ability of Dorea formicigenerans to survive and function in the anaerobic conditions of the gut underscores its potential significance in maintaining gut homeostasis and contributing to the host's metabolic profile.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
Strainstrain AF25-11

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans strain AF25-11 AF25-11.Scaf102, whole genome

Gene Summary

Adenine Count

980208 bp

Thymine Count

977970 bp

Guanine Count

671148 bp

Cytosine Count

672805 bp

Genome Length

3302668 bp

Protein-coding Genes

3025 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDWY33_05890Not AvailableNegative1249502 - 125063541586.1
duf4956 domain-containing proteinDWY33_05895Not AvailableNegative1251030 - 125170125049.3
vtc domain-containing proteinDWY33_05900Not AvailableNegative1251720 - 125254132080.6
spore coat protein cothDWY33_05905Not AvailableNegative1252528 - 125430368206.1
hypothetical proteinDWY33_05910Not AvailableNegative1254290 - 125576254240.8
duf3492 domain-containing proteinDWY33_05915Not AvailableNegative1255743 - 125716755099.2
duf2194 domain-containing proteinDWY33_05920Not AvailableNegative1257180 - 125899768277.8
hypothetical proteinDWY33_05925Not AvailableNegative1259003 - 125989935462.5
nad(p)-dependent oxidoreductaseDWY33_05930Not AvailableNegative1259896 - 126200781839.1
duf3841 domain-containing proteinDWY33_05935Not AvailablePositive1262284 - 126285322874.2

Displaying genes 1181 – 1190 of 3114 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.