Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DWY53_04920 | Not Available | Positive | 1243850 - 1245052 | 44901.3 |
| yjbq family protein | DWY53_04925 | Not Available | Positive | 1245061 - 1245474 | 15533.7 |
| hypothetical protein | DWY53_04930 | Not Available | Negative | 1245504 - 1245689 | 7314.11 |
| hypothetical protein | DWY53_04935 | Not Available | Positive | 1245876 - 1246481 | 23278.7 |
| aldehyde dehydrogenase family protein | DWY53_04940 | Not Available | Positive | 1246852 - 1250172 | 124041.0 |
| hypothetical protein | DWY53_04945 | Not Available | Positive | 1250424 - 1250696 | 10520.9 |
| dna-binding response regulator | DWY53_04950 | Not Available | Negative | 1250725 - 1251498 | 29809.8 |
| histidine kinase | DWY53_04955 | Not Available | Negative | 1251491 - 1252519 | 38942.7 |
| tolc family protein | DWY53_04960 | Not Available | Negative | 1252660 - 1253949 | 48546.9 |
| glsb/yeaq/ymge family stress response membrane protein | DWY53_04975 | Not Available | Positive | 1258280 - 1258531 | 8688.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

