Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DWY53_04865 | Not Available | Negative | 1234679 - 1235224 | 20808.2 |
| galactose mutarotase | DWY53_04875 | Not Available | Positive | 1235858 - 1236991 | 41888.4 |
| sigma-70 family rna polymerase sigma factor | DWY53_04880 | Not Available | Positive | 1237178 - 1237648 | 18010.0 |
| hypothetical protein | DWY53_04885 | Not Available | Positive | 1237639 - 1238205 | 21072.0 |
| duf5024 domain-containing protein | DWY53_04890 | Not Available | Positive | 1238227 - 1238841 | 22972.6 |
| mfs transporter | DWY53_04895 | Not Available | Positive | 1239043 - 1240320 | 46736.2 |
| dna helicase uvrb | DWY53_04900 | Not Available | Positive | 1240379 - 1240945 | 21270.7 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DWY53_04905 | Not Available | Positive | 1240974 - 1241675 | 26175.7 |
| duf4836 family protein | DWY53_04910 | Not Available | Positive | 1241680 - 1243212 | 56148.8 |
| atp-binding cassette domain-containing protein | DWY53_04915 | Not Available | Positive | 1243209 - 1243853 | 24439.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

