Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_04815 | Not Available | Negative | 1220997 - 1222484 | 57462.9 |
| insulinase family protein | DWY53_04820 | Not Available | Negative | 1222494 - 1225313 | 106220.0 |
| thioredoxin-disulfide reductase | DWY53_04825 | Not Available | Negative | 1225344 - 1226291 | 34005.6 |
| hypothetical protein | DWY53_04830 | Not Available | Negative | 1226361 - 1226975 | 22975.4 |
| dna translocase ftsk | DWY53_04835 | Not Available | Negative | 1226992 - 1229457 | 91840.0 |
| duf5063 domain-containing protein | DWY53_04840 | Not Available | Positive | 1229562 - 1230125 | 21633.7 |
| 3'-5' exonuclease domain-containing protein 2 | DWY53_04845 | Not Available | Positive | 1230122 - 1230772 | 24635.5 |
| class i sam-dependent rrna methyltransferase | DWY53_04850 | Not Available | Positive | 1230762 - 1231946 | 44449.1 |
| class i sam-dependent methyltransferase | DWY53_04855 | Not Available | Negative | 1232599 - 1233387 | 30974.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | DWY53_04860 | Not Available | Negative | 1233444 - 1234682 | 47303.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

