Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DWY53_04765 | Not Available | Negative | 1210345 - 1212642 | 82892.6 |
| mfs transporter | DWY53_04770 | Not Available | Negative | 1212825 - 1214042 | 43390.6 |
| serine--trna ligase | DWY53_04775 | Not Available | Negative | 1214182 - 1215456 | 47884.3 |
| nicotinamide riboside transporter pnuc | DWY53_04780 | Not Available | Positive | 1215576 - 1216148 | 22114.5 |
| thiamine diphosphokinase | DWY53_04785 | Not Available | Positive | 1216135 - 1216770 | 23793.5 |
| 50s ribosomal protein l27 | DWY53_04790 | Not Available | Negative | 1216827 - 1217090 | 9251.19 |
| 50s ribosomal protein l21 | DWY53_04795 | Not Available | Negative | 1217112 - 1217429 | 11743.4 |
| had family hydrolase | DWY53_04800 | Not Available | Negative | 1217643 - 1219712 | 79713.3 |
| nlpc/p60 family protein | DWY53_04805 | Not Available | Negative | 1219768 - 1220280 | 19478.6 |
| abc transporter atp-binding protein | DWY53_04810 | Not Available | Negative | 1220277 - 1220984 | 26432.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

