Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphorylase | DWY53_04715 | Not Available | Negative | 1201659 - 1202537 | 32767.5 |
| upf0365 family protein | DWY53_04720 | Not Available | Negative | 1202731 - 1203732 | 36124.0 |
| nodulation efficiency protein d (nfed) | DWY53_04725 | Not Available | Negative | 1203875 - 1204345 | 17112.5 |
| hypothetical protein | DWY53_04730 | Not Available | Negative | 1204359 - 1205768 | 54158.7 |
| adenine nucleotide alpha hydrolase family protein | DWY53_04735 | Not Available | Positive | 1205912 - 1206667 | 29155.8 |
| hypothetical protein | DWY53_04740 | Not Available | Negative | 1207361 - 1207582 | 8477.08 |
| hypothetical protein | DWY53_04745 | Not Available | Positive | 1208180 - 1208461 | 10751.2 |
| hypothetical protein | DWY53_04750 | Not Available | Negative | 1208610 - 1208888 | 10801.4 |
| hypothetical protein | DWY53_04755 | Not Available | Positive | 1208843 - 1209217 | 14330.9 |
| duf4858 domain-containing protein | DWY53_04760 | Not Available | Negative | 1209164 - 1209934 | 29526.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

