Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_04660 | Not Available | Negative | 1192128 - 1192354 | 8533.29 |
| relaxase | DWY53_04665 | Not Available | Negative | 1192389 - 1193597 | 46009.7 |
| metalloproteinase | DWY53_04670 | Not Available | Negative | 1193594 - 1194022 | 16266.5 |
| hypothetical protein | DWY53_04675 | Not Available | Negative | 1194129 - 1194347 | 8505.65 |
| mobilization protein | DWY53_04680 | Not Available | Negative | 1194344 - 1195414 | 40322.2 |
| dna-binding protein | DWY53_04685 | Not Available | Negative | 1195420 - 1195794 | 14328.4 |
| hypothetical protein | DWY53_04690 | Not Available | Negative | 1195888 - 1196886 | 37875.6 |
| site-specific integrase | DWY53_04695 | Not Available | Negative | 1197066 - 1198181 | 43883.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DWY53_04705 | Not Available | Negative | 1199458 - 1200954 | 55215.1 |
| gaf domain-containing protein | DWY53_04710 | Not Available | Negative | 1200965 - 1201450 | 18119.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

