Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_04610 | Not Available | Positive | 1183134 - 1184327 | 46280.4 |
| epsg family protein | DWY53_04615 | Not Available | Positive | 1184340 - 1185449 | 43492.6 |
| glycosyltransferase family 2 protein | DWY53_04620 | Not Available | Positive | 1185473 - 1186438 | 37512.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DWY53_04625 | Not Available | Positive | 1186435 - 1187157 | 27268.8 |
| nad-dependent epimerase/dehydratase family protein | DWY53_04630 | Not Available | Positive | 1187157 - 1188215 | 39338.5 |
| licd family protein | DWY53_04635 | Not Available | Positive | 1188212 - 1189045 | 32408.9 |
| glycosyltransferase family 2 protein | DWY53_04640 | Not Available | Positive | 1189150 - 1189962 | 31956.7 |
| nad(p)-dependent oxidoreductase | DWY53_04645 | Not Available | Positive | 1189974 - 1190987 | 37876.7 |
| hypothetical protein | DWY53_04650 | Not Available | Positive | 1190984 - 1191773 | 30437.5 |
| hypothetical protein | DWY53_04655 | Not Available | Positive | 1191926 - 1192127 | 7782.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

