Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | DWY53_04505 | Not Available | Positive | 1156315 - 1157001 | 25372.3 |
| na+/glucose cotransporter | DWY53_04515 | Not Available | Negative | 1157293 - 1158864 | 57690.5 |
| cobalamin-binding protein | DWY53_04520 | Not Available | Negative | 1158898 - 1160700 | 66651.9 |
| alpha-xylosidase | DWY53_04525 | Not Available | Negative | 1160706 - 1162952 | 86498.6 |
| right-handed parallel beta-helix repeat-containing protein | DWY53_04530 | Not Available | Negative | 1162963 - 1164843 | 70465.3 |
| transcription termination factor rho | DWY53_04535 | Not Available | Negative | 1165068 - 1167077 | 74375.6 |
| rida family protein | DWY53_04540 | Not Available | Positive | 1167505 - 1167882 | 13268.1 |
| hypothetical protein | DWY53_04545 | Not Available | Positive | 1168045 - 1169235 | 45216.1 |
| mbl fold metallo-hydrolase | DWY53_04550 | Not Available | Positive | 1169245 - 1170036 | 30363.8 |
| lactoylglutathione lyase | DWY53_04555 | Not Available | Positive | 1170054 - 1170431 | 14724.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

