Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DWY53_04235 | Not Available | Negative | 1078492 - 1079067 | 22518.4 |
| glycoside hydrolase family 92 protein | DWY53_04240 | Not Available | Negative | 1079272 - 1081494 | 83529.0 |
| hypothetical protein | DWY53_04245 | Not Available | Negative | 1081588 - 1082244 | 25291.7 |
| site-specific integrase | DWY53_04250 | Not Available | Positive | 1082578 - 1083813 | 47965.3 |
| rhum protein | DWY53_04255 | Not Available | Positive | 1083826 - 1084188 | 13467.5 |
| dna-binding protein | DWY53_04260 | Not Available | Negative | 1084271 - 1084576 | 11900.3 |
| dna-binding protein | DWY53_04265 | Not Available | Negative | 1084607 - 1084945 | 13101.3 |
| peptide chain release factor 1 | DWY53_04270 | Not Available | Positive | 1084914 - 1085018 | 3978.12 |
| dna-binding protein | DWY53_04275 | Not Available | Positive | 1085123 - 1085467 | 12880.5 |
| dna-binding protein | DWY53_04280 | Not Available | Positive | 1085471 - 1085821 | 13935.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

