Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | DWY53_04025 | Not Available | Negative | 1013817 - 1015700 | 70822.6 |
| alkaline phosphatase | DWY53_04030 | Not Available | Negative | 1015718 - 1016620 | 33071.8 |
| glycosidase | DWY53_04035 | Not Available | Negative | 1016778 - 1017956 | 44114.3 |
| aryl-sulfate sulfotransferase | DWY53_04040 | Not Available | Negative | 1018070 - 1019869 | 68255.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_04045 | Not Available | Negative | 1020071 - 1021837 | 67710.5 |
| tonb-dependent receptor | DWY53_04050 | Not Available | Negative | 1021864 - 1024893 | 110540.0 |
| glycoside hydrolase | DWY53_04055 | Not Available | Negative | 1025724 - 1027238 | 55611.5 |
| hypothetical protein | DWY53_04060 | Not Available | Positive | 1027348 - 1027578 | 9117.75 |
| arac family transcriptional regulator | DWY53_04065 | Not Available | Negative | 1027571 - 1028461 | 34355.3 |
| pyrroline-5-carboxylate reductase | DWY53_04070 | Not Available | Negative | 1028644 - 1029417 | 27215.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

