Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DWY53_03970 | Not Available | Positive | 995368 - 998646 | 120445.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWY53_03975 | Not Available | Positive | 998674 - 1000560 | 72167.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWY53_03985 | Not Available | Positive | 1004252 - 1006222 | 74037.4 |
| hypothetical protein | DWY53_03990 | Not Available | Negative | 1006534 - 1006998 | 17313.7 |
| acetyl-coa synthetase | DWY53_03995 | Not Available | Negative | 1007043 - 1008695 | 62298.4 |
| cupin domain-containing protein | DWY53_04000 | Not Available | Negative | 1008779 - 1009333 | 20522.8 |
| duf1893 domain-containing protein | DWY53_04005 | Not Available | Negative | 1009511 - 1009930 | 15717.2 |
| 4fe-4s dicluster domain-containing protein | DWY53_04010 | Not Available | Negative | 1009948 - 1011474 | 55328.3 |
| aldo/keto reductase | DWY53_04015 | Not Available | Negative | 1011510 - 1012892 | 52411.6 |
| hypothetical protein | DWY53_04020 | Not Available | Positive | 1013129 - 1013425 | 11172.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

