Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_03920 | Not Available | Negative | 977348 - 978688 | 49757.6 |
| glycoside hydrolase family 28 protein | DWY53_03925 | Not Available | Negative | 978697 - 980028 | 49440.7 |
| hydrolase | DWY53_03930 | Not Available | Negative | 980095 - 982851 | 104378.0 |
| six-hairpin glycosidase | DWY53_03935 | Not Available | Negative | 982903 - 986214 | 126744.0 |
| hypothetical protein | DWY53_03940 | Not Available | Positive | 986250 - 986459 | 8280.6 |
| kama family protein | DWY53_03945 | Not Available | Positive | 986534 - 988645 | 81887.2 |
| tonb-dependent receptor | DWY53_03950 | Not Available | Negative | 988734 - 991067 | 87163.8 |
| hypothetical protein | DWY53_03955 | Not Available | Negative | 991199 - 991537 | 12713.8 |
| bifunctional metallophosphatase/5'-nucleotidase | DWY53_03960 | Not Available | Negative | 991542 - 993284 | 65649.8 |
| sensor histidine kinase | DWY53_03965 | Not Available | Negative | 993296 - 995194 | 71307.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

