Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF25-30LB
Accession NumberQRUD00000000.1
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_00175 | Not Available | + | 45877 - 47595 | 60547.0 |
| duf2264 domain-containing protein | DWY53_00180 | Not Available | + | 47707 - 49995 | 88897.6 |
| hypothetical protein | DWY53_00185 | Not Available | + | 50016 - 51587 | 59436.1 |
| hypothetical protein | DWY53_00190 | Not Available | + | 51631 - 52179 | 20766.8 |
| l-rhamnose mutarotase | DWY53_00195 | Not Available | + | 52609 - 52992 | 15091.2 |
| aldo/keto reductase | DWY53_00200 | Not Available | + | 53033 - 53965 | 34598.1 |
| amidohydrolase | DWY53_00205 | Not Available | + | 53977 - 54900 | 35316.9 |
| l-fucose:h+ symporter permease | DWY53_00210 | Not Available | + | 54897 - 56150 | 47126.7 |
| sorbitol dehydrogenase | DWY53_00215 | Not Available | + | 56188 - 57204 | 36570.6 |
| tagaturonate reductase | DWY53_00220 | Not Available | + | 57234 - 58676 | 54307.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
