Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation repair protein | DWY53_03765 | Not Available | Positive | 934571 - 935287 | 28303.2 |
| n-glycanase | DWY53_03770 | Not Available | Negative | 935392 - 936642 | 46706.9 |
| duf4301 family protein | DWY53_03775 | Not Available | Negative | 936762 - 938279 | 56797.3 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DWY53_03780 | Not Available | Positive | 938423 - 940636 | 84511.3 |
| diacylglycerol kinase family protein | DWY53_03785 | Not Available | Positive | 940658 - 941011 | 12967.2 |
| duf1573 domain-containing protein | DWY53_03790 | Not Available | Positive | 941106 - 941519 | 14899.0 |
| metallophosphoesterase | DWY53_03795 | Not Available | Positive | 941728 - 942534 | 31228.2 |
| hypothetical protein | DWY53_03800 | Not Available | Positive | 942500 - 943261 | 30020.0 |
| oligopeptide transporter, opt family | DWY53_03805 | Not Available | Positive | 943347 - 945338 | 70071.7 |
| alpha/beta hydrolase | DWY53_03810 | Not Available | Positive | 945372 - 946217 | 30944.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

