Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase biob | DWY53_03715 | Not Available | Negative | 923774 - 924733 | 35544.0 |
| hypothetical protein | DWY53_03720 | Not Available | Negative | 924746 - 925111 | 13987.2 |
| alpha-amylase | DWY53_03725 | Not Available | Negative | 925264 - 926658 | 53209.7 |
| glycosyltransferase family 1 protein | DWY53_03730 | Not Available | Negative | 926677 - 927942 | 47628.2 |
| 4-alpha-glucanotransferase | DWY53_03735 | Not Available | Negative | 927957 - 929897 | 74889.3 |
| rhomboid family intramembrane serine protease | DWY53_03740 | Not Available | Positive | 930078 - 930743 | 25282.1 |
| formate-dependent phosphoribosylglycinamide formyltransferase | DWY53_03745 | Not Available | Negative | 931224 - 932393 | 42895.6 |
| pspc domain-containing protein | DWY53_03750 | Not Available | Negative | 932491 - 933537 | 38246.6 |
| padr family transcriptional regulator | DWY53_03755 | Not Available | Negative | 933550 - 933876 | 12456.0 |
| gnat family n-acetyltransferase | DWY53_03760 | Not Available | Positive | 934053 - 934550 | 19247.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

