Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | DWY53_03660 | Not Available | Negative | 913325 - 914758 | 52090.3 |
| dihydrodipicolinate synthase family protein | DWY53_03665 | Not Available | Negative | 914772 - 915704 | 34028.5 |
| atp-binding cassette domain-containing protein | DWY53_03670 | Not Available | Negative | 915867 - 917315 | 55026.9 |
| diaminopimelate epimerase | DWY53_03675 | Not Available | Positive | 917840 - 918025 | 7191.76 |
| hypothetical protein | DWY53_03680 | Not Available | Positive | 918040 - 918765 | 25732.9 |
| atp-dependent dethiobiotin synthetase biod | DWY53_03690 | Not Available | Negative | 919209 - 919853 | 24302.0 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DWY53_03695 | Not Available | Negative | 919868 - 920623 | 28797.8 |
| duf452 family protein | DWY53_03700 | Not Available | Negative | 920635 - 921288 | 25130.3 |
| 8-amino-7-oxononanoate synthase | DWY53_03705 | Not Available | Negative | 921285 - 922436 | 43109.2 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DWY53_03710 | Not Available | Negative | 922464 - 923735 | 47742.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

