Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | DWY53_03610 | Not Available | Positive | 899818 - 901320 | 55113.9 |
| cytochrome d ubiquinol oxidase subunit ii | DWY53_03615 | Not Available | Positive | 901475 - 902620 | 42798.5 |
| 6-phosphogluconolactonase | DWY53_03620 | Not Available | Negative | 902916 - 903620 | 26417.3 |
| glucose-6-phosphate dehydrogenase | DWY53_03625 | Not Available | Negative | 903682 - 905190 | 58278.9 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | DWY53_03630 | Not Available | Negative | 905239 - 906675 | 53142.1 |
| dicarboxylate/amino acid:cation symporter | DWY53_03635 | Not Available | Positive | 906760 - 907938 | 42069.5 |
| hypothetical protein | DWY53_03640 | Not Available | Negative | 908143 - 909312 | 45056.2 |
| l-asparaginase 2 | DWY53_03645 | Not Available | Negative | 909400 - 910458 | 37843.8 |
| anaerobic c4-dicarboxylate transporter | DWY53_03650 | Not Available | Negative | 910626 - 911924 | 45850.3 |
| nitronate monooxygenase | DWY53_03655 | Not Available | Positive | 912166 - 913116 | 34187.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

