Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_03560 | Not Available | Negative | 890041 - 890265 | 8812.7 |
| duf5053 domain-containing protein | DWY53_03565 | Not Available | Negative | 890541 - 890963 | 16187.5 |
| recombinase | DWY53_03570 | Not Available | Negative | 891275 - 892456 | 45903.5 |
| dna-binding response regulator | DWY53_03575 | Not Available | Negative | 892835 - 893560 | 27866.9 |
| histidine kinase | DWY53_03580 | Not Available | Negative | 893557 - 894612 | 40178.1 |
| abc transporter permease | DWY53_03585 | Not Available | Negative | 894806 - 896026 | 44142.1 |
| abc transporter atp-binding protein | DWY53_03590 | Not Available | Negative | 896045 - 896788 | 27239.8 |
| efflux rnd transporter periplasmic adaptor subunit | DWY53_03595 | Not Available | Negative | 896830 - 898053 | 44062.9 |
| tolc family protein | DWY53_03600 | Not Available | Negative | 898079 - 899422 | 50244.3 |
| duf4492 domain-containing protein | DWY53_03605 | Not Available | Positive | 899576 - 899794 | 8685.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

