Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DWY53_03500 | Not Available | Positive | 876796 - 878853 | 79362.9 |
| hypothetical protein | DWY53_03505 | Not Available | Positive | 879029 - 879151 | 4309.2 |
| hypothetical protein | DWY53_03510 | Not Available | Negative | 879228 - 880106 | 33598.2 |
| hypothetical protein | DWY53_03515 | Not Available | Positive | 880353 - 881711 | 51090.7 |
| phosphonoacetaldehyde hydrolase | DWY53_03520 | Not Available | Positive | 881754 - 882542 | 29120.3 |
| vwa domain-containing protein | DWY53_03535 | Not Available | Negative | 884998 - 886311 | 51489.8 |
| atpase | DWY53_03540 | Not Available | Negative | 886283 - 887905 | 62427.7 |
| methyltransferase domain-containing protein | DWY53_03545 | Not Available | Positive | 888156 - 888590 | 16302.6 |
| hypothetical protein | DWY53_03550 | Not Available | Positive | 888687 - 889358 | 24843.5 |
| hypothetical protein | DWY53_03555 | Not Available | Positive | 889765 - 890007 | 9285.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

