Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | DWY53_03450 | Not Available | Positive | 860617 - 861255 | 23832.3 |
| glycine dehydrogenase (aminomethyl-transferring) | DWY53_03455 | Not Available | Positive | 861291 - 864140 | 105224.0 |
| s9 family peptidase | DWY53_03460 | Not Available | Negative | 864421 - 867135 | 102723.0 |
| hypothetical protein | DWY53_03465 | Not Available | Negative | 867168 - 867404 | 8867.62 |
| hypothetical protein | DWY53_03470 | Not Available | Positive | 867528 - 867755 | 8214.64 |
| formate--tetrahydrofolate ligase | DWY53_03475 | Not Available | Negative | 867787 - 869454 | 60542.1 |
| iron-containing alcohol dehydrogenase | DWY53_03480 | Not Available | Positive | 869543 - 870718 | 43312.5 |
| hypothetical protein | DWY53_03485 | Not Available | Positive | 871031 - 872254 | 48490.2 |
| hypothetical protein | DWY53_03490 | Not Available | Positive | 872260 - 872841 | 23391.4 |
| atp-binding protein | DWY53_03495 | Not Available | Positive | 872825 - 876478 | 144617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

