Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_03400 | Not Available | Negative | 850715 - 850924 | 7947.52 |
| hypothetical protein | DWY53_03405 | Not Available | Negative | 851093 - 851407 | 11444.2 |
| hypothetical protein | DWY53_03410 | Not Available | Positive | 851653 - 852135 | 18372.9 |
| long-chain fatty acid--coa ligase | DWY53_03415 | Not Available | Positive | 852347 - 854011 | 62496.0 |
| lipoyl(octanoyl) transferase lipb | DWY53_03420 | Not Available | Negative | 854221 - 855309 | 40837.7 |
| phosphohydrolase | DWY53_03425 | Not Available | Positive | 855375 - 856076 | 27643.2 |
| hypothetical protein | DWY53_03430 | Not Available | Positive | 856073 - 856621 | 20508.7 |
| copper-translocating p-type atpase | DWY53_03435 | Not Available | Negative | 856709 - 858922 | 79986.0 |
| duf3298 domain-containing protein | DWY53_03440 | Not Available | Positive | 859101 - 859949 | 32059.0 |
| ribosomal rna small subunit methyltransferase g | DWY53_03445 | Not Available | Positive | 859970 - 860599 | 23835.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

