Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF25-30LB
Accession NumberQRUD00000000.1
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_00125 | Not Available | + | 34777 - 36501 | 64779.1 |
| hypothetical protein | DWY53_00130 | Not Available | + | 36517 - 37071 | 21303.9 |
| beta-porphyranase a | DWY53_00135 | Not Available | + | 37167 - 38990 | 69605.2 |
| beta-porphyranase a | DWY53_00140 | Not Available | + | 39041 - 41227 | 81342.4 |
| hypothetical protein | DWY53_00145 | Not Available | + | 41233 - 42543 | 47978.2 |
| hypothetical protein | DWY53_00150 | Not Available | + | 42943 - 43146 | 7572.3 |
| hypothetical protein | DWY53_00155 | Not Available | + | 43266 - 43487 | 8582.51 |
| beta-porphyranase b | DWY53_00160 | Not Available | + | 43548 - 44513 | 37254.8 |
| hypothetical protein | DWY53_00165 | Not Available | + | 44560 - 45051 | 18562.1 |
| hypothetical protein | DWY53_00170 | Not Available | + | 45289 - 45801 | 18426.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
