Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 806633 - 806708 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 806726 - 806801 | Not Available |
| hypothetical protein | DWY53_03210 | Not Available | Negative | 806932 - 807150 | 8572.49 |
| hypothetical protein | DWY53_03215 | Not Available | Negative | 807612 - 808196 | 21886.3 |
| hypothetical protein | DWY53_03220 | Not Available | Negative | 808249 - 808497 | 9624.58 |
| hypothetical protein | DWY53_03225 | Not Available | Negative | 808514 - 810838 | 88990.3 |
| rna methyltransferase | DWY53_03230 | Not Available | Positive | 810940 - 811695 | 27939.9 |
| hypothetical protein | DWY53_03235 | Not Available | Negative | 811767 - 812090 | 12264.8 |
| duf4296 domain-containing protein | DWY53_03240 | Not Available | Negative | 812106 - 813080 | 37387.3 |
| lipoprotein signal peptidase | DWY53_03245 | Not Available | Negative | 813084 - 813722 | 24149.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

