Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DWY53_03145 | Not Available | Negative | 795352 - 796371 | 37541.6 |
| iron abc transporter permease | DWY53_03150 | Not Available | Negative | 796374 - 797411 | 36729.8 |
| iron abc transporter substrate-binding protein | DWY53_03155 | Not Available | Negative | 797423 - 798574 | 43275.9 |
| precorrin-2 c(20)-methyltransferase | DWY53_03160 | Not Available | Positive | 798678 - 799406 | 27466.2 |
| hypothetical protein | DWY53_03165 | Not Available | Negative | 799369 - 799782 | 15741.7 |
| tagaturonate reductase | DWY53_03170 | Not Available | Negative | 799884 - 801323 | 53907.1 |
| uronate isomerase | DWY53_03175 | Not Available | Positive | 801649 - 803055 | 54309.7 |
| tlpa family protein disulfide reductase | DWY53_03180 | Not Available | Negative | 803144 - 804331 | 45699.5 |
| mbl fold metallo-hydrolase | DWY53_03190 | Not Available | Positive | 805644 - 806447 | 29856.9 |
| Trna-lys | Not Available | Not Available | Positive | 806536 - 806611 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

