Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWY53_03090 | Not Available | Negative | 782475 - 783362 | 34067.1 |
| arac family transcriptional regulator | DWY53_03095 | Not Available | Negative | 783394 - 784302 | 35396.4 |
| gnat family n-acetyltransferase | DWY53_03105 | Not Available | Positive | 784973 - 785773 | 30582.8 |
| duf1016 family protein | DWY53_03110 | Not Available | Positive | 785920 - 787023 | 42588.9 |
| flavodoxin | DWY53_03115 | Not Available | Positive | 787323 - 787859 | 19869.9 |
| flavin reductase family protein | DWY53_03120 | Not Available | Positive | 787865 - 788425 | 20230.2 |
| precorrin-3b c(17)-methyltransferase | DWY53_03125 | Not Available | Positive | 789083 - 790489 | 51753.8 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | DWY53_03130 | Not Available | Positive | 790494 - 791675 | 44294.9 |
| precorrin-4 c(11)-methyltransferase | DWY53_03135 | Not Available | Positive | 791697 - 793508 | 67020.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | DWY53_03140 | Not Available | Positive | 793534 - 795330 | 66015.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

