Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_03040 | Not Available | Positive | 767573 - 768130 | 21451.8 |
| hypothetical protein | DWY53_03045 | Not Available | Positive | 768157 - 768366 | 7700.39 |
| ribonucleoside-diphosphate reductase subunit alpha | DWY53_03050 | Not Available | Positive | 768769 - 771288 | 95735.6 |
| ribonucleotide-diphosphate reductase subunit beta | DWY53_03055 | Not Available | Positive | 771451 - 772500 | 41347.9 |
| methylenetetrahydrofolate reductase | DWY53_03060 | Not Available | Negative | 772591 - 773544 | 35944.1 |
| tonb-dependent receptor | DWY53_03065 | Not Available | Negative | 773841 - 776144 | 85921.1 |
| hypothetical protein | DWY53_03070 | Not Available | Negative | 776253 - 776633 | 13813.3 |
| tonb-dependent receptor | DWY53_03075 | Not Available | Positive | 777072 - 779249 | 81222.5 |
| abc transporter substrate-binding protein | DWY53_03080 | Not Available | Positive | 779263 - 780420 | 43492.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DWY53_03085 | Not Available | Negative | 780528 - 782288 | 64568.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

