Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | DWY53_02880 | Not Available | Positive | 715094 - 715498 | 15197.6 |
| argininosuccinate lyase | DWY53_02885 | Not Available | Positive | 715513 - 716853 | 50645.4 |
| l-glyceraldehyde 3-phosphate reductase | DWY53_02890 | Not Available | Positive | 716877 - 717869 | 36721.9 |
| Trna-gly | Not Available | Not Available | Positive | 717940 - 718012 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 718029 - 718116 | Not Available |
| dna-3-methyladenine glycosylase i | DWY53_02905 | Not Available | Negative | 718466 - 719044 | 22222.7 |
| tonb-dependent receptor | DWY53_02910 | Not Available | Positive | 719355 - 721655 | 86518.3 |
| duf4374 domain-containing protein | DWY53_02915 | Not Available | Positive | 721713 - 723113 | 51082.5 |
| pepsy domain-containing protein | DWY53_02920 | Not Available | Positive | 723130 - 724326 | 45293.5 |
| magnesium transporter cora family protein | DWY53_02925 | Not Available | Negative | 724420 - 725343 | 35626.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

