Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4595 domain-containing protein | DWY53_02730 | Not Available | Negative | 685983 - 686783 | 30557.0 |
| hypothetical protein | DWY53_02735 | Not Available | Negative | 686834 - 687586 | 29871.3 |
| site-specific integrase | DWY53_02740 | Not Available | Negative | 688174 - 688761 | 22501.7 |
| duf3871 family protein | DWY53_02745 | Not Available | Negative | 689070 - 690083 | 38245.9 |
| winged helix-turn-helix transcriptional regulator | DWY53_02750 | Not Available | Negative | 690287 - 691093 | 30785.1 |
| hypothetical protein | DWY53_02755 | Not Available | Negative | 691143 - 691328 | 7320.59 |
| hypothetical protein | DWY53_02760 | Not Available | Negative | 691635 - 691817 | 7236.87 |
| hypothetical protein | DWY53_02765 | Not Available | Positive | 692573 - 692872 | 11560.8 |
| hypothetical protein | DWY53_02770 | Not Available | Positive | 692920 - 693510 | 23175.7 |
| atp-binding protein | DWY53_02775 | Not Available | Negative | 693608 - 694576 | 34981.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

